A ribbon diagram depicting the crystal structure of the GPIb? N-terminal domain including the VWF A1 and thrombin binding sites.
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Ribbon diagrams are simple, yet powerful, in expressing the visual basics of a molecular structure ( twist, fold and unfold ).
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Although the ribbon diagram shows a hole in the protein's central core, the amino acid side chains are not shown in this representation.
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In 1982, Arthur M . Lesk and co-workers first enabled automatic generation of ribbon diagrams through a computational implementation that uses Protein Data Bank files as input.
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A similar diagram illustrates the enzyme article, but it's not as good as this one, IMO . Ribbon diagrams are 3-D depictions of protein structure.
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An example of an enzyme that contains a cofactor is carbonic anhydrase, which is shown in the ribbon diagram above with a zinc cofactor bound as part of its active site.
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UCSF Chimera is a powerful molecular modeling program that also includes Python ) that operates in interactive mode and also produces presentation-quality 2D images for ribbon diagrams and many other representations.
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Since their inception, and continuing in the present, a ribbon diagram is the single most common representation of protein structures and a very common choice of cover image for a journal or textbook.
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Ribbon diagrams of ?-helices are a prominent element in the laser-etched crystal sculptures of protein structures created by artist Bathsheba Grossman, such as those of insulin, hemoglobin, and DNA polymerase.
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An image that looks pretty to most people, and is potentially informative for at least an appreciable minority, strikes me as a net benefit . ( And usually the infobox right below those ribbon diagrams contains links to structural biology databases, so the image serves to draw attention to useful external resources . ) When deciding whether or not something is just " eye candy ", one must consider the staggering breadth of skills, interests, and expertise of Wikipedia's millions of various readers . talk ) 05 : 01, 24 January 2017 ( UTC)
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